The purpose for which EndNote has been developed is clear, manage all the bibliography of any project no matter what its content is, and for this purpose it has a clear interface that doesn't stand out due to its design, but does due to how practical it is. 3.There are multiple applications dedicated to bibliography management, but if there is a program designed for this purpose that stands out over all the rest, that has to be EndNote, the program developed by the prestigious media company Thomson Reuters. Functional Genomic Landscape of Human Breast Cancer Drivers, Vulnerabilities, and Resistance. Gene isoforms as expression-based biomarkers predictive of drug response in vitro. !Synapse:syn2346643/wiki/62255 UHN PSet Raw Data Sources: 1. Quantification of sensitivity and resistance of breast cancer cell lines to anti-cancer drugs using GR metrics. Modeling precision treatment of breast cancer. PharmacoGx (Bioconductor R Package), Version: 3.8 Joe Gray's laboratory, and the University Health Network (UHN) breast cancer screen (UHNBreast).ĬWL, Reproducibility, Pharmacogenomics, PharmacoSet, PSet, Breast CancerĬommon Workflow Language (CWL), Version: 0228155703 We have created PSets for multiple updates of the Oregon Health and Science University (OHSU) breast cancer screen generated within Dr.

Research Object for each respective PSetĪ PSet is a data object that possesses cell line and drug curations, processed drug sensitivity, and molecular profile data for a pharmacogenomic dataset. This dataset contains the following data that were generated through our reproducible PharmacoGx CWL workflows:ġ.

Haibe-Kains, Benjamin (University of Toronto) Haibe-Kains, Benjamin (Princess Margaret Cancer Centre, University of Toronto, Ontario Institute of Cancer Research, Vector Institute for Artificial Intelligence)

Safikhani, Zhaleh (Princess Margaret Cancer Centre, University of Toronto, Vector Institute for Artificial Intelligence)īa-Alawi, Wail (Princess Margaret Cancer Centre) Smirnov, Petr (Princess Margaret Cancer Centre, University of Toronto) Mammoliti, Anthony (Princess Margaret Cancer Centre)

Creating reproducible pharmacogenomic analysis pipelines

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